MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data

Authors

Scott W. Doniger, University of California - San Francisco
Nathan Salomonis, University of California - San FranciscoFollow
Kam D. Dahlquist, Loyola Marymount UniversityFollow
Karen Vranizan, University of California - San FranciscoFollow
Steven C. Lawlor, University of California - San FranciscoFollow
Bruce R. Conklin, University of California - San FranciscoFollow

Document Type

Article

Publication Date

2003

Abstract

MAPPFinder is a tool that creates a global gene-expression profile across all areas of biology by integrating the annotations of the Gene Ontology (GO) Project with the free software package GenMAPP (http://www.GenMAPP.org). The results are displayed in a searchable browser, allowing the user to rapidly identify GO terms with over-represented numbers of geneexpression changes. Clicking on GO terms generates GenMAPP graphical files where gene relationships can be explored, annotated, and files can be freely exchanged.

Digital Commons @ LMU & LLS Citation

Doniger, S.W., Salomonis, N., Dahlquist, K.D., Vranizan, K., Lawlor, S.C., & Conklin, B.R. (2003) MAPPFinder: Using Gene Ontology and GenMAPP to Create a Global Gene-Expression Profile from Microarray Data. Genome Biology 4: R7.

The electronic version of this article is the complete one and can be found online at http://genomebiology.com/2003/4/1/R7

© 2003 Doniger et al.; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all
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