Faculty publications from the Department of Biology at LMU can be found here.

Follow

Works from 2016

PDF

Preliminary Report: A survey of aggressive behaviors in the American coot (Fulica americana) at Ballona Wetlands, California, Victor D. Carmona-Galindo, Mariele Anne Courtois, and Kiara Cerda

PDF

GRNsight: a web application and service for visualizing models of small- to medium-scale gene regulatory networks, Kam D. Dahlquist, John David N. Dionisio, Ben G. Fitzpatrick, Nicole A. Anguiano, Anindita Varshneya, Britain J. Southwick, and Mihir Samdarshi

Works from 2015

PDF

Parameter Estimation for Gene Regulatory Networks from Microarray Data: Cold Shock Response in Saccharomyces cerevisiae, Kam D. Dahlquist, Ben G. Fitzpatrick, Erika T. Camacho, Stephanie D. Entzminger, and Nathan C. Wanner

PDF

Proteomic analysis of cardiac response to thermal acclimation in the eurythermal goby fish Gillichthys mirabilis, W. Wesley Dowd, Nishad Jayasundara, Lars Tomanek, and George N. Somero

PDF

Thermal Variation, Thermal Extremes and the Physiological Performance of Individuals, W. Wesley Dowd, Felicia A. King, and Mark W. Denny

Works from 2014

PDF

Differential Resource allocation of black mustard plants (Brassica nigra L.) with proximity to black walnut trees (Jug/ans californica L.) in a Southern California Riparian ecosystem, Victor D. Carmona-Galindo, Matt Cronrod, and Kellyanne Gold

PDF

Sub-Canopy Temperature Dynamics of a Native Tree Plantation from a Lowland Tropical Rainforest in Costa Rica, Victor D. Carmona-Galindo, Traci-Lynn Hirai, Stacie Samuelson, Cherie Hale, and Elizabeth Braker

PDF

Characterization of Sugar Diversity in Floral and Extra-Floral Nectar from the Coastal Coral Tree (Erythrina caffra Thunb.) in Southern California, Victor D. Carmona-Galindo, Kenny Morales, Renee Maser, Julius Doyle, and Mera Gobrial

PDF

Exploration of climate influences on the abundance of galls on red willow (Salix /aevigata) across two riparian communities in Southern California, Victor D. Carmona-Galindo, Rachael Sears, Tauras P. Vilgalys, Emily Hand, and Sara Morledge-Hampton

PDF

Insect visitation of peduncular and petiolar extrafloral nectar glands on castor bean (Ricinus communis L.) plants in Southern California, Victor D. Carmona-Galindo, Taylor Waters, and David Chirikian

Works from 2013

PDF

La Diversidad de los Análisis de Diversidad La Diversidad de los Analisis de Diversidad [The Diversity of Diversity Analyses], Victor D. Carmona-Galindo and Tizziana V. Carmona

PDF

A preliminary study of Ricinus communis survivorship at Ballona Wetlands and Temescal Canyon, Los Angeles, California, Victor D. Carmona-Galindo, Daryle Hinton-Hardin, Jodi Kagihara, and Mary Rose Pascua

PDF

Differential bait preference and rate of attraction by Argentine ants (Linepithema humile Mayr) at freshwater and saltwater marsh sites in southern California, Victor D. Carmona-Galindo, Meghan Moore, and Melanie Tansuwan

PDF

Anthropogenic Impacts of Irrigation on the Arthropod Community Structure of a Coastal Sage Scrub Habitat in Los Angeles, Victor D. Carmona, Justin Aquino, and Mindi Catala

PDF

An Examination of Opuntia Littoralis Fruit Volume, Sugar Concentration, Number of Seeds and Average Seed Mass in Relation to Fitness, Victor D. Carmona, Kathleen Foster, and Carolyne Hoey

PDF

Relationship Between Elaiosome and EFN Gland Size in Castor Bean (Ricinus Communis L.), an Exotic Mymercophyte in Southern California, Victor D. Carmona, Andrew Henslin, and Lisa Liceaga

PDF

Assessing the Impact of Invasive Species Management Strategies on the Population Dynamics of Castor Bean (Ricinus communis L., euphorbiaceae) at Two Southern California Coastal Habitats, Victor D. Carmona, Daryle Hinton-Hardin, Jodi Kagihara, and Mary Rose T. Pascua

PDF

The Relationship Between Castor Bean Stem Diameter and Extrafloral Nectary Gland Size, Victor D. Carmona, Stephen Line, and Kevin Hong

PDF

Behavior and survival of Mytilus congeners following episodes of elevated body temperature in air and seawater, W. Wesley Dowd and George N. Somero

Works from 2012

PDF

Biophysics, environmental stochasticity, and the evolution of thermal safety margins in intertidal limpets, W. Wesley Dowd and M. W. Denny

Works from 2011

PDF

Preliminary Report: Investigation of Castor Bean Investment in Extra-Floral Nectary Glands and Reproduction, Victor D. Carmona-Galindo, Kavita Goss, Tina Marie Moger, and Ashton Nielson

PDF

Relationship between Soil Sodium Concentration and Plant Height in Salicornia Virginica in the Ballona Wetlands in Los Angeles, California, Victor D. Carmona, Molly Bogeberg, and Stephanie Vivanco

PDF

A Preliminary Study of Heteromeles Arbutifolia Fruit Morphology at Ballona Wetlands and Temescal Canyon, Los Angeles, California, Victor D. Carmona, Phil Simmons, Elise Vo, and Elizabeth Wight

Works from 2010

Link

Proceedings of the 11th Annual Bioinformatics Open Source Conference (BOSC) 2010, Kam D. Dahlquist

PDF

The BioPAX Community Standard for Pathway Data Sharing, E. Demir, M. P. Cary, S. Paley, K. Fukuda, C. Lemer, I. Vastrik, G. Wu, P. D’Eustachio, C. Schaefer, J. Luciano, F. Schacherer, I. Martinez-Flores, Z. Hu, V. Jimenez-Jacinto, G. Joshi-Tope, K. Kandasamy, A. C. Lopez-Fuentes, H. Mi, E. Pichler, I. Rodchenkov, A. Splendiani, S. Tkachev, J. Zucker, G. Gopinath, H. Rajasimha, R. Ramakrishnan, I. Shah, M. Syed, N. Anwar, O. Babur, M. Blinov, E. Brauner, D. Corwin, S. Donaldson, F. Gibbons, R. Goldberg, R. Hornbeck, A. Luna, P. Murray-Rust, E. Neumann, O. Reubenacker, M. Samwald, M. van Iersel, S. Wimalaratne, K. Allen, B. Braun, M. Whirl-Carrillo, K. H. Cheung, Kam D. Dahlquist, A. Finney, M. Gillespie, E. Glass, L. Gong, M. Honig, O. Hubaut, D. Kane, S. Krupa, M. Kutmon, J. Leonard, D. Marks, D. Merberg, V. Petri, A. Pico, D. Ravenscroft, L. Ren, N. Shah, M. Sunshine, R. Tang, R. Whaley, S. Letovksi, K. H. Buetow, A. Rzhetsky, V. Schachter, B. S. Sobral, U. Dogrusoz, S. McWeeney, M. Aladjem, E. Birney, J. Collado-Vides, S. Goto, M. Hucka, N. Le Novère, N. Maltsev, A. Pandey, P. Thomas, E. Wingender, P. D. Karp, C. Sander, and G. D. Bader

PDF

Proteomic and physiological responses of leopard sharks (Triakis semifasciata) to salinity change, W. Wesley Dowd, B. N. Harris, J.J. Chech Jr, and D. Kültz

PDF

Candidate Genes for Chromosomes 6 and 10: Quantitative Trait Loci for Age-Related Retinal Degeneration in Mice, D.G. Ogando, Kam D. Dahlquist, M. Alizadeh, K. Kunchithapautham, J. Li, N. Yu, M.M. LaVail, B. Rohrer, D. Vollrath, and M. Danciger

PDF

Male Remating Success and the Frequency of Copulatory Plugs in the Green Lynx Spider Peucetia viridans (Araneae, Oxyopidae), Martina G. Ramirez, Angelik C. Achekian, Catherine R. Coverley, Rachel M. Pierce, Sarah S. Eiman, and Melissa M. Wetkowski

Works from 2009

PDF

Evidence for Multiple Paternity in Broods of the Green Lynx Spider Peucetia viridans (Araneae: Oxyopidae), Martina G. Ramirez

Works from 2008

PDF

Improving the Computer Science in Bioinformatics Through Open Source Pedagogy, John David N. Dionisio and Kam D. Dahlquist

Works from 2007

PDF

GenMAPP 2: New Features and Resources for Pathway Analysis, Nathan Salomonis, Kristina Hanspers, Alexander C. Zambon, Karen Vranizan, Steven C. Lawlor, Kam D. Dahlquist, Scott W. Doniger, Josh Stuart, Bruce R. Conklin, and Alexander R. Pico

Works from 2006

PDF

Estimating consumption rates of juvenile sandbar sharks (Carcharhinus plumbeus) in Chesapeake Bay, Virginia, using a bioenergetics model, W. Wesley Dowd, Richard W. Brill, Peter G. Bushnell, and John A. Musick

PDF

Standard and routine metabolic rates of juvenile sandbar sharks (Carcharhinus plumbeus), including the effects of body mass and acute temperature change, W. Wesley Dowd, Richard W. Brill, Peter G. Bushnell, and John A. Musick

Works from 2003

PDF

MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data, Scott W. Doniger, Nathan Salomonis, Kam D. Dahlquist, Karen Vranizan, Steven C. Lawlor, and Bruce R. Conklin

PDF

Web Orientation of the Banded Garden Spider Argiope Trifasciata (Araneae, Araneidae) in a California Coastal Population, Martina G. Ramirez

PDF

Regression Approaches for Microarray Data Analysis, Mark R. Segal, Kam D. Dahlquist, and Bruce R. Conklin

Works from 1996

PDF

Genetic Variability and Gene Flow in Metepeira Ventura (Araneae, Araneidae), Martina G. Ramirez

Works from 1995

PDF

Natural History of the Spider Genus Lutica (Araneae, Zodariidae), Martina G. Ramirez

PDF

Phylogeny and Historical Biogeography of the Spider Genus Lutica (Araneae, Zodariidae), Martina G. Ramirez